Index

B

binsize (hic.HiC attribute)

bootstrap (module)

C

chromosomes (hic.HiC attribute)

compute_adjacent() (in module genes) current (hic.HiC attribute)

D

dist_all_pairs (module)

dist_pairs_indep (module) distlib (module)

F

filter_values() (in module distlib)

G

genes (module)

get_contact() (hic.HiC method)

H

HiC (class in hic)

hic (module)

I

informative_traits (module)

inter (hic.HiC attribute) iolib (module)

J

join_pairs (module)

L

load_all_maps() (hic.HiC method)

load_map() (hic.HiC method)

M

make_bed() (in module genes)

make_pairs (module)

N

norm_center (module)

NoSuchHeatmap

P

phylip() (in module iolib)

R

read_bed() (in module genes)

read_orthos() (in module iolib) read_values() (in module iolib)

S

scaled_L2norm() (in module distlib)

statshic (module)

W

write_bed() (in module genes)